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Fix bootstrap.sh problems

Jeremy Soller requested to merge DomThePorcupine:master into master

Created by: DomThePorcupine

There were a lot of problems pointed out to me with the initial pull of this file. I think I have fixed them all,

  • Fixed allowing for alternative package managers under Debian/Ubuntu
  • Fixed assuming yes to installing packages, now user is prompted to agree
  • Fixed blindly installing git, QEMU, Virtualbox, etc. these things are tested for and skipped over if installed
  • Changed default emulator to QEMU
  • Added ability to install QEMU on OSX
  • Added comment advising qemu_no_kvm on OSX
  • Cleaned up other general things

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